Questions tagged [imagej-hyperstack]

ImageJ stores and displays 5D (XYCZT) data in HyperStacks.

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How to generate valid HyperStack ImageJ data files from Matlab?

ImageJ HyperStacks have a data type (8-32 bit), a width, a height, a number of channels, a number of slices and a number of frames. They represent 5D (XYCZT) data sets. ImageJ stores them as multipage tiff files where number of channels times number…
Trilarion
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how to use imageJ to merge different channels and do a z stack average

I have ten tiff files and each of them contains two channels imaging data, I want to labeling different colors for the two channels and after that do a z projection, anyone knows how to do it?
XIN
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