I have the commands below that I use to make plots in R. The main text file is cross_correlation.csv.
How can I put it in bash script so that when I launch it on the terminal, the R commands will perform their jobs and finish (like all other shell scripts).
cross_correlation <- read.table(file.choose(), header=F, sep="\t")
barplot(cross_correlation$V3)
dev.copy(png,"cc.png",width=8,height=6,units="in",res=100)
dev.off()
hist(cross_correlation$V3, breaks=15, prob=T)
dev.copy(png,"hist_cc.png",width=8,height=6,units="in",res=100)
dev.off()