Why is G1 Full GC being triggered seeminly unnecessarily?

Question

I am using

java version "1.7.0_09"
Java(TM) SE Runtime Environment (build 1.7.0_09-b05)
Java HotSpot(TM) 64-Bit Server VM (build 23.5-b02, mixed mode)

with G1 garbage collector. JVM argumens are

-server -Xss4096k -XX:MaxPermSize=512m -XX:PermSize=512m -Xms30G 
-Xmx30G -Xnoclassgc -XX:+UseNUMA -XX:+UseFastAccessorMethods 
-XX:ReservedCodeCacheSize=48m -XX:+UseStringCache 
-XX:+UseGCOverheadLimit -Duser.timezone=EET 
-Xmaxf1 -XX:+UseCompressedOops -XX:+DisableExplicitGC 
-XX:+AggressiveOpts -XX:CMSInitiatingOccupancyFraction=70 
-XX:+ParallelRefProcEnabled -XX:+UseAdaptiveSizePolicy 
-XX:MaxGCPauseMillis=500 -XX:+UseG1GC 
-XX:InitiatingHeapOccupancyPercent=0 
-XX:GCPauseIntervalMillis=10000 -XX:+PrintGCDetails 
-XX:+PrintHeapAtGC -XX:+PrintGCDateStamps -Xloggc:gc.log

However, I am experiencing following Full GC scans without any apparent reason, how to get rid of them?

GC log with some tail from preceding events:

{Heap before GC invocations=206 (full 8):
 garbage-first heap   total 31457280K, used 18323299K [0x00007fc6eb800000, 0x00007fce6b800000, 0x00007fce6b800000)
  region size 8192K, 768 young (6291456K), 31 survivors (253952K)
 compacting perm gen  total 524288K, used 145771K [0x00007fce6b800000, 0x00007fce8b800000, 0x00007fce8b800000)
   the space 524288K,  27% used [0x00007fce6b800000, 0x00007fce7465af18, 0x00007fce7465b000, 0x00007fce8b800000)
No shared spaces configured.
2013-01-16T11:45:31.290+0200: 20430.451: [GC pause (young), 0.54738500 secs]
   [Parallel Time: 510.7 ms]
      [GC Worker Start (ms):  20430451.7  20430451.8  20430451.8  20430451.8
       Avg: 20430451.8, Min: 20430451.7, Max: 20430451.8, Diff:   0.1]
      [Ext Root Scanning (ms):  22.3  68.3  21.8  20.8
       Avg:  33.3, Min:  20.8, Max:  68.3, Diff:  47.5]
      [Update RS (ms):  21.6  0.0  23.6  23.7
       Avg:  17.3, Min:   0.0, Max:  23.7, Diff:  23.7]
         [Processed Buffers : 77 0 18 55
          Sum: 150, Avg: 37, Min: 0, Max: 77, Diff: 77]
      [Scan RS (ms):  19.6  0.1  19.3  19.6
       Avg:  14.7, Min:   0.1, Max:  19.6, Diff:  19.5]
      [Object Copy (ms):  439.1  434.2  437.8  438.4
       Avg: 437.4, Min: 434.2, Max: 439.1, Diff:   4.9]
      [Termination (ms):  0.0  0.0  0.0  0.0
       Avg:   0.0, Min:   0.0, Max:   0.0, Diff:   0.0]
         [Termination Attempts : 1 1 1 1
          Sum: 4, Avg: 1, Min: 1, Max: 1, Diff: 0]
      [GC Worker End (ms):  20430954.5  20430954.6  20430954.5  20430954.4
       Avg: 20430954.5, Min: 20430954.4, Max: 20430954.6, Diff:   0.1]
      [GC Worker (ms):  502.7  502.8  502.7  502.6
       Avg: 502.7, Min: 502.6, Max: 502.8, Diff:   0.2]
      [GC Worker Other (ms):  8.0  8.0  8.0  8.1
       Avg:   8.0, Min:   8.0, Max:   8.1, Diff:   0.1]
   [Clear CT:   2.6 ms]
   [Other:  34.1 ms]
      [Choose CSet:   0.1 ms]
      [Ref Proc:  27.4 ms]
      [Ref Enq:   0.2 ms]
      [Free CSet:   5.4 ms]
   [Eden: 5896M(5896M)->0B(5688M) Survivors: 248M->456M Heap: 17893M(30720M)->12208M(30720M)]
 [Times: user=2.12 sys=0.02, real=0.55 secs]
Heap after GC invocations=207 (full 8):
 garbage-first heap   total 31457280K, used 12501684K [0x00007fc6eb800000, 0x00007fce6b800000, 0x00007fce6b800000)
  region size 8192K, 57 young (466944K), 57 survivors (466944K)
 compacting perm gen  total 524288K, used 145771K [0x00007fce6b800000, 0x00007fce8b800000, 0x00007fce8b800000)
   the space 524288K,  27% used [0x00007fce6b800000, 0x00007fce7465af18, 0x00007fce7465b000, 0x00007fce8b800000)
No shared spaces configured.
}
{Heap before GC invocations=207 (full 8):
 garbage-first heap   total 31457280K, used 19058524K [0x00007fc6eb800000, 0x00007fce6b800000, 0x00007fce6b800000)
  region size 8192K, 727 young (5955584K), 57 survivors (466944K)
 compacting perm gen  total 524288K, used 145775K [0x00007fce6b800000, 0x00007fce8b800000, 0x00007fce8b800000)
   the space 524288K,  27% used [0x00007fce6b800000, 0x00007fce7465bdd8, 0x00007fce7465be00, 0x00007fce8b800000)
No shared spaces configured.
2013-01-16T11:46:26.619+0200: 20485.781: [GC pause (mixed), 1.42356500 secs]
   [Parallel Time: 1385.9 ms]
      [GC Worker Start (ms):  20485786.6  20485786.6  20485786.6  20485786.7
       Avg: 20485786.6, Min: 20485786.6, Max: 20485786.7, Diff:   0.1]
      [Ext Root Scanning (ms):  22.1  70.0  22.2  21.3
       Avg:  33.9, Min:  21.3, Max:  70.0, Diff:  48.7]
      [Update RS (ms):  9.9  0.0  10.9  11.2
       Avg:   8.0, Min:   0.0, Max:  11.2, Diff:  11.2]
         [Processed Buffers : 13 0 25 17
          Sum: 55, Avg: 13, Min: 0, Max: 25, Diff: 25]
      [Scan RS (ms):  324.6  276.4  324.6  324.6
       Avg: 312.5, Min: 276.4, Max: 324.6, Diff:  48.2]
      [Object Copy (ms):  1021.1  1031.2  1019.8  1020.5
       Avg: 1023.1, Min: 1019.8, Max: 1031.2, Diff:  11.4]
      [Termination (ms):  0.0  0.0  0.0  0.0
       Avg:   0.0, Min:   0.0, Max:   0.0, Diff:   0.0]
         [Termination Attempts : 6 5 5 1
          Sum: 17, Avg: 4, Min: 1, Max: 6, Diff: 5]
      [GC Worker End (ms):  20487164.3  20487164.3  20487164.3  20487164.3
       Avg: 20487164.3, Min: 20487164.3, Max: 20487164.3, Diff:   0.0]
      [GC Worker (ms):  1377.7  1377.6  1377.6  1377.6
       Avg: 1377.7, Min: 1377.6, Max: 1377.7, Diff:   0.1]
      [GC Worker Other (ms):  8.2  8.3  8.3  8.3
       Avg:   8.3, Min:   8.2, Max:   8.3, Diff:   0.1]
   [Clear CT:   4.4 ms]
   [Other:  33.3 ms]
      [Choose CSet:   5.5 ms]
      [Ref Proc:   5.0 ms]
      [Ref Enq:   0.2 ms]
      [Free CSet:   9.1 ms]
   [Eden: 5360M(5688M)->0B(5784M) Survivors: 456M->360M Heap: 18616M(30720M)->11359M(30720M)]
 [Times: user=5.56 sys=0.01, real=1.42 secs]
Heap after GC invocations=208 (full 8):
 garbage-first heap   total 31457280K, used 11632594K [0x00007fc6eb800000, 0x00007fce6b800000, 0x00007fce6b800000)
  region size 8192K, 45 young (368640K), 45 survivors (368640K)
 compacting perm gen  total 524288K, used 145775K [0x00007fce6b800000, 0x00007fce8b800000, 0x00007fce8b800000)
   the space 524288K,  27% used [0x00007fce6b800000, 0x00007fce7465bdd8, 0x00007fce7465be00, 0x00007fce8b800000)
No shared spaces configured.
}
{Heap before GC invocations=208 (full 8):
 garbage-first heap   total 31457280K, used 11632594K [0x00007fc6eb800000, 0x00007fce6b800000, 0x00007fce6b800000)
  region size 8192K, 45 young (368640K), 45 survivors (368640K)
 compacting perm gen  total 524288K, used 145775K [0x00007fce6b800000, 0x00007fce8b800000, 0x00007fce8b800000)
   the space 524288K,  27% used [0x00007fce6b800000, 0x00007fce7465bdd8, 0x00007fce7465be00, 0x00007fce8b800000)
No shared spaces configured.
2013-01-16T11:46:28.060+0200: 20487.222: [Full GC 11359M->8807M(30720M), 32.4879420 secs]
 [Times: user=45.41 sys=0.21, real=32.48 secs]
Heap after GC invocations=209 (full 9):
 garbage-first heap   total 31457280K, used 9019206K [0x00007fc6eb800000, 0x00007fce6b800000, 0x00007fce6b800000)
  region size 8192K, 0 young (0K), 0 survivors (0K)
 compacting perm gen  total 524288K, used 145775K [0x00007fce6b800000, 0x00007fce8b800000, 0x00007fce8b800000)
   the space 524288K,  27% used [0x00007fce6b800000, 0x00007fce7465bdd8, 0x00007fce7465be00, 0x00007fce8b800000)
No shared spaces configured.
}

Other similar ones:

{Heap before GC invocations=105 (full 4):
 garbage-first heap   total 31457280K, used 12638024K [0x00007fcb22800000, 0x00007fd2a2800000, 0x00007fd2a2800000)
  region size 8192K, 56 young (458752K), 56 survivors (458752K)
 compacting perm gen  total 524288K, used 147352K [0x00007fd2a2800000, 0x00007fd2c2800000, 0x00007fd2c2800000)
   the space 524288K,  28% used [0x00007fd2a2800000, 0x00007fd2ab7e61f8, 0x00007fd2ab7e6200, 0x00007fd2c2800000)
No shared spaces configured.
2013-01-14T10:31:31.240+0200: 14185.812: [Full GC 12341M->7092M(30720M), 25.3417840 secs]
 [Times: user=35.12 sys=0.21, real=25.33 secs]
Heap after GC invocations=106 (full 5):
 garbage-first heap   total 31457280K, used 7262578K [0x00007fcb22800000, 0x00007fd2a2800000, 0x00007fd2a2800000)
  region size 8192K, 0 young (0K), 0 survivors (0K)
 compacting perm gen  total 524288K, used 147352K [0x00007fd2a2800000, 0x00007fd2c2800000, 0x00007fd2c2800000)
   the space 524288K,  28% used [0x00007fd2a2800000, 0x00007fd2ab7e61f8, 0x00007fd2ab7e6200, 0x00007fd2c2800000)
No shared spaces configured.
}

{Heap before GC invocations=248 (full 11):
 garbage-first heap   total 31457280K, used 12262418K [0x00007fcb22800000, 0x00007fd2a2800000, 0x00007fd2a2800000)
  region size 8192K, 37 young (303104K), 37 survivors (303104K)
 compacting perm gen  total 524288K, used 152608K [0x00007fd2a2800000, 0x00007fd2c2800000, 0x00007fd2c2800000)
   the space 524288K,  29% used [0x00007fd2a2800000, 0x00007fd2abd082e8, 0x00007fd2abd08400, 0x00007fd2c2800000)
No shared spaces configured.
2013-01-14T13:01:39.869+0200: 23194.441: [Full GC 11975M->7331M(30720M), 28.6147390 secs]
 [Times: user=40.31 sys=0.03, real=28.62 secs]
Heap after GC invocations=249 (full 12):
 garbage-first heap   total 31457280K, used 7507920K [0x00007fcb22800000, 0x00007fd2a2800000, 0x00007fd2a2800000)
  region size 8192K, 0 young (0K), 0 survivors (0K)
 compacting perm gen  total 524288K, used 152608K [0x00007fd2a2800000, 0x00007fd2c2800000, 0x00007fd2c2800000)
   the space 524288K,  29% used [0x00007fd2a2800000, 0x00007fd2abd082e8, 0x00007fd2abd08400, 0x00007fd2c2800000)
No shared spaces configured.
}

{Heap before GC invocations=399 (full 19):
 garbage-first heap   total 31457280K, used 13016093K [0x00007fcb22800000, 0x00007fd2a2800000, 0x00007fd2a2800000)
  region size 8192K, 54 young (442368K), 54 survivors (442368K)
 compacting perm gen  total 524288K, used 155475K [0x00007fd2a2800000, 0x00007fd2c2800000, 0x00007fd2c2800000)
   the space 524288K,  29% used [0x00007fd2a2800000, 0x00007fd2abfd4c70, 0x00007fd2abfd4e00, 0x00007fd2c2800000)
No shared spaces configured.
2013-01-14T15:31:36.484+0200: 32191.056: [Full GC 12711M->7543M(30720M), 29.5013210 secs]
 [Times: user=41.39 sys=0.06, real=29.50 secs]
Heap after GC invocations=400 (full 20):
 garbage-first heap   total 31457280K, used 7724994K [0x00007fcb22800000, 0x00007fd2a2800000, 0x00007fd2a2800000)
  region size 8192K, 0 young (0K), 0 survivors (0K)
 compacting perm gen  total 524288K, used 155475K [0x00007fd2a2800000, 0x00007fd2c2800000, 0x00007fd2c2800000)
   the space 524288K,  29% used [0x00007fd2a2800000, 0x00007fd2abfd4c70, 0x00007fd2abfd4e00, 0x00007fd2c2800000)
No shared spaces configured.
}

{Heap before GC invocations=476 (full 26):
 garbage-first heap   total 31457280K, used 14622246K [0x00007fcb22800000, 0x00007fd2a2800000, 0x00007fd2a2800000)
  region size 8192K, 27 young (221184K), 27 survivors (221184K)
 compacting perm gen  total 524288K, used 156716K [0x00007fd2a2800000, 0x00007fd2c2800000, 0x00007fd2c2800000)
   the space 524288K,  29% used [0x00007fd2a2800000, 0x00007fd2ac10b2b0, 0x00007fd2ac10b400, 0x00007fd2c2800000)
No shared spaces configured.
2013-01-14T18:46:41.545+0200: 43896.117: [Full GC 14279M->8107M(30720M), 31.6936770 secs]
 [Times: user=44.40 sys=0.18, real=31.69 secs]
Heap after GC invocations=477 (full 27):
 garbage-first heap   total 31457280K, used 8302054K [0x00007fcb22800000, 0x00007fd2a2800000, 0x00007fd2a2800000)
  region size 8192K, 0 young (0K), 0 survivors (0K)
 compacting perm gen  total 524288K, used 156551K [0x00007fd2a2800000, 0x00007fd2c2800000, 0x00007fd2c2800000)
   the space 524288K,  29% used [0x00007fd2a2800000, 0x00007fd2ac0e1fa0, 0x00007fd2ac0e2000, 0x00007fd2c2800000)
No shared spaces configured.
}

{Heap before GC invocations=522 (full 34):
 garbage-first heap   total 31457280K, used 16096219K [0x00007fcb22800000, 0x00007fd2a2800000, 0x00007fd2a2800000)
  region size 8192K, 30 young (245760K), 30 survivors (245760K)
 compacting perm gen  total 524288K, used 156869K [0x00007fd2a2800000, 0x00007fd2c2800000, 0x00007fd2c2800000)
   the space 524288K,  29% used [0x00007fd2a2800000, 0x00007fd2ac1315d8, 0x00007fd2ac131600, 0x00007fd2c2800000)
No shared spaces configured.
2013-01-14T22:31:40.711+0200: 57395.283: [Full GC 15718M->11933M(30720M), 42.0857250 secs]
 [Times: user=60.13 sys=0.07, real=42.08 secs]
Heap after GC invocations=523 (full 35):
 garbage-first heap   total 31457280K, used 12219927K [0x00007fcb22800000, 0x00007fd2a2800000, 0x00007fd2a2800000)
  region size 8192K, 0 young (0K), 0 survivors (0K)
 compacting perm gen  total 524288K, used 156869K [0x00007fd2a2800000, 0x00007fd2c2800000, 0x00007fd2c2800000)
   the space 524288K,  29% used [0x00007fd2a2800000, 0x00007fd2ac1315d8, 0x00007fd2ac131600, 0x00007fd2c2800000)
No shared spaces configured.
}

Other similar issue reports:

http://grokbase.com/t/openjdk/hotspot-gc-use/1192sy84j5/g1c-strange-full-gc-behavior http://grokbase.com/p/openjdk/hotspot-gc-use/123ydf9c92/puzzling-why-is-a-full-gc-triggered-here http://mail.openjdk.java.net/pipermail/hotspot-gc-use/2013-February/001484.html

I have been analyzing the issue using appdynamics profiler and I have found out that every time Full GC occurs, Code Cache (configured to its maximum) is full. It seems like a bug in GC.

See also the profiler image, two unnecessary Full GC:s in middle between 24/5 and 25/5. More importantly, they kill the server usability, because they last 60 seconds each:

Profiler log image http://eisler.vps.kotisivut.com/logs/g1gc-code-cache-full-gc-bug-illustration.png

See also discussion about Azul's pauseless GC, they seem to have worked out this kind of issues http://www.artima.com/lejava/articles/azul_pauseless_gc.html

Is that the entire GS log, or have you left/edited stuff out? — Stephen C, Jan 15 '13 at 03:03
The entire GS log is over 24 hours long so yes it is edited version of simply the juicy parts. — Martin, Jan 15 '13 at 07:52
Well the clues as to why the JVM *needed* to do full GCs are not here. — Stephen C, Jan 16 '13 at 00:30
Well, if you read carefully, that's the point of the whole question: there are no clues in the log why Full GC is necessary -> is it a bug in JVM? I added some preceding events, please have look if there is any indication of anything that could lead to a Full GC. — Martin, Jan 17 '13 at 02:30
well if you think carefully, the point of my comment is that while **you** can't see any clues in the parts of the log that you left out **other people** might! — Stephen C, Jan 17 '13 at 04:45

score 7 · Answer 1 · edited May 23 '17 at 10:29

7

please see my reply in G1GC long pause with initial-mark

your every setting should has a solid reason to be here...and unfortunately some of them don't have e.g. -XX:+UseBiasedLocking (used for combination of tenured and young generation GCs, but G1GC is capable to handle both) -XX:+DisableExplicitGC (its unpredictable, in my experience its never restrict explicit gc calls)

please use/tweak accordingly below mentioned settings to get optimum results, I'm giving you baseline to move forward, hope so these settings will work for you: Java G1 garbage collection in production

edited May 23 '17 at 10:29

Community

1
1

answered Feb 20 '13 at 15:05

emkays

424
8
14

Thanks. The reason why we have some 'shotgun' parameters is because they are so poorly documented what goes where and which affects which ... Why you think `+UseAdaptiveSizePolicy` is not a good idea? Also `-XX:+DoEscapeAnalysis` should be on by default in JDK7? Does actual value of GCPauseIntervalMillis matter or just the ratio MaxGCPauseMillis/GCPauseIntervalMillis? – Martin Feb 25 '13 at 07:52
This answer did not yet help fix the problem. – Martin Mar 12 '13 at 03:38
@emkays G1 is recommended when your heapsize is larger than 6GB. – Vipin Aug 02 '14 at 19:11

score 5 · Accepted Answer · answered May 28 '13 at 02:08

5

We recorded this bug on 1.7._u06 and upgraded to 1.7.0_21-b11 just a couple of days ago and we haven't seen any Full GC's since upgrade, so it seems like this bug was fixed in JVM. The code cache memory profiles look much nicer now too in the profiler. In the past, this problem used to be a daily one, one to more times per day.

If the situation changes, I will report back. Until then, I consider this problem solved with the upgrade.

answered May 28 '13 at 02:08

Martin

1,285
14
20

We ran into further issues with higher loads that could not be solved with the hotspot jvm. Finally, we found a longer term solution with Azul's Zing jvm. My experience is very positive, practically all problems are gone and I spend zero time tuning it. This is quite significant considering that I would previously spend couple hours each day tuning and analyzing g1gc, quite a cost saving 20 days per month couple hours of work. Most significant benefits are: 1)no tuning needed 2)no Full GC:s any more, longest delays in milliseconds 3)http://www.azulsystems.com/products/zing/technical-case – Martin Oct 27 '14 at 23:17

Why is G1 Full GC being triggered seeminly unnecessarily?

2 Answers2